IL_1Y69_141
3D structure
- PDB id
- 1Y69 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- RRF domain I in complex with the 50S ribosomal subunit from Deinococcus radiodurans
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.33 Å
Loop
- Sequence
- GCACU*AAAC
- Length
- 9 nucleotides
- Bulged bases
- 1Y69|1|0|A|879
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_1Y69_141 not in the Motif Atlas
- Homologous match to IL_7A0S_029
- Geometric discrepancy: 0.4264
- The information below is about IL_7A0S_029
- Detailed Annotation
- C-loop
- Broad Annotation
- No text annotation
- Motif group
- IL_16301.2
- Basepair signature
- cWW-cWS-tWH-R-L-R-cWW
- Number of instances in this motif group
- 10
Unit IDs
1Y69|1|0|G|877
1Y69|1|0|C|878
1Y69|1|0|A|879
1Y69|1|0|C|880
1Y69|1|0|U|881
*
1Y69|1|0|A|921
1Y69|1|0|A|922
1Y69|1|0|A|923
1Y69|1|0|C|924
Current chains
- Chain 0
- 23S ribosomal RNA
Nearby chains
- Chain 9
- 5S ribosomal RNA; 5S rRNA
- Chain K
- 50S ribosomal protein L16
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