IL_1ZZN_003
3D structure
- PDB id
- 1ZZN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of a group I intron/two exon complex that includes all catalytic metal ion ligands.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.37 Å
Loop
- Sequence
- CUAAG*UAUG
- Length
- 9 nucleotides
- Bulged bases
- 1ZZN|1|B|U|82
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_1ZZN_003 not in the Motif Atlas
- Geometric match to IL_5Y7M_005
- Geometric discrepancy: 0.2637
- The information below is about IL_5Y7M_005
- Detailed Annotation
- Receptor of 11-nt loop-receptor motif
- Broad Annotation
- Loop-receptor motif
- Motif group
- IL_87739.1
- Basepair signature
- cWW-tWH-cSH-cWW
- Number of instances in this motif group
- 10
Unit IDs
1ZZN|1|B|C|61
1ZZN|1|B|U|62
1ZZN|1|B|A|63
1ZZN|1|B|A|64
1ZZN|1|B|G|65
*
1ZZN|1|B|U|80
1ZZN|1|B|A|81
1ZZN|1|B|U|82
1ZZN|1|B|G|83
Current chains
- Chain B
- 197-MER
Nearby chains
- Chain C
- 5'-R(*AP*AP*GP*CP*CP*AP*CP*AP*CP*AP*AP*AP*CP*CP*AP*GP*AP*CP*GP*GP*CP*C)-3'
Coloring options: