IL_1ZZN_012
3D structure
- PDB id
- 1ZZN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of a group I intron/two exon complex that includes all catalytic metal ion ligands.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.37 Å
Loop
- Sequence
- GAAAC*GCAAC
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_1ZZN_012 not in the Motif Atlas
- Geometric match to IL_1U6B_002
- Geometric discrepancy: 0.0983
- The information below is about IL_1U6B_002
- Detailed Annotation
- Double sheared with non-canonical cWW
- Broad Annotation
- Double sheared
- Motif group
- IL_87767.3
- Basepair signature
- cWW-L-R-tSH-tHS-cWW
- Number of instances in this motif group
- 18
Unit IDs
1ZZN|1|B|G|56
1ZZN|1|B|A|57
1ZZN|1|B|A|58
1ZZN|1|B|A|59
1ZZN|1|B|C|60
*
1ZZN|1|B|G|84
1ZZN|1|B|C|85
1ZZN|1|B|A|86
1ZZN|1|B|A|87
1ZZN|1|B|C|88
Current chains
- Chain B
- 197-MER
Nearby chains
- Chain C
- 5'-R(*AP*AP*GP*CP*CP*AP*CP*AP*CP*AP*AP*AP*CP*CP*AP*GP*AP*CP*GP*GP*CP*C)-3'
- Chain D
- 5'-R(*CP*AP*(5MU))-3'
Coloring options: