IL_22TU_003
3D structure
- PDB id
- 22TU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human 80S ribosome in complex with DHX29
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- CC*GCG
- Length
- 5 nucleotides
- Bulged bases
- 22TU|1|L8|C|150
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_22TU_003 not in the Motif Atlas
- Homologous match to IL_8GLP_001
- Geometric discrepancy: 0.0926
- The information below is about IL_8GLP_001
- Detailed Annotation
- Single bulged C
- Broad Annotation
- No text annotation
- Motif group
- IL_05642.6
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 72
Unit IDs
22TU|1|L5|C|6
22TU|1|L5|C|7
*
22TU|1|L8|G|149
22TU|1|L8|C|150
22TU|1|L8|G|151
Current chains
- Chain L5
- 28S rRNA
- Chain L8
- 5.8S rRNA
Nearby chains
- Chain LG
- 60S ribosomal protein L7a
- Chain LN
- 60S ribosomal protein L15
- Chain LX
- 60S ribosomal protein L23a
Coloring options: