IL_22TU_020
3D structure
- PDB id
- 22TU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human 80S ribosome in complex with DHX29
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- GAAC*GAGUUCAAGAGGGC
- Length
- 18 nucleotides
- Bulged bases
- 22TU|1|L5|G|409, 22TU|1|L5|G|413
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
22TU|1|L5|G|387
22TU|1|L5|A|388
22TU|1|L5|A|389
22TU|1|L5|C|390
*
22TU|1|L5|G|401
22TU|1|L5|A|402
22TU|1|L5|G|403
22TU|1|L5|U|404
22TU|1|L5|U|405
22TU|1|L5|C|406
22TU|1|L5|A|407
22TU|1|L5|A|408
22TU|1|L5|G|409
22TU|1|L5|A|410
22TU|1|L5|G|411
22TU|1|L5|G|412
22TU|1|L5|G|413
22TU|1|L5|C|414
Current chains
- Chain L5
- 28S rRNA
Nearby chains
- Chain L8
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain LP
- 60S ribosomal protein L17
- Chain LY
- 60S ribosomal protein L26
- Chain Ll
- 60S ribosomal protein L39
- Chain zx
- nascent peptide
Coloring options: