IL_22TU_057

3D structure

PDB id

22TU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human 80S ribosome in complex with DHX29

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GAAAG*CUAGUAGC

Length

13 nucleotides

Bulged bases

22TU|1|L5|A|1650, 22TU|1|L5|G|1654

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

22TU|1|L5|G|1522
22TU|1|L5|A|1523
22TU|1|L5|A|1524
22TU|1|L5|A|1525
22TU|1|L5|G|1526
*
22TU|1|L5|C|1648
22TU|1|L5|U|1649
22TU|1|L5|A|1650
22TU|1|L5|G|1651
22TU|1|L5|U|1652
22TU|1|L5|A|1653
22TU|1|L5|G|1654
22TU|1|L5|C|1655

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LC

60S ribosomal protein L4

Chain LL

60S ribosomal protein L13

Chain LN

60S ribosomal protein L15

Chain La

60S ribosomal protein L27a

Chain Lj

60S ribosomal protein L37