IL_22TU_082
3D structure
- PDB id
- 22TU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human 80S ribosome in complex with DHX29
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- GACCCCAGAAAA*UGAAAAUGGAUGGCGC
- Length
- 28 nucleotides
- Bulged bases
- 22TU|1|L5|C|1935, 22TU|1|L5|A|2041, 22TU|1|L5|U|2044, 22TU|1|L5|G|2045
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
22TU|1|L5|G|1933
22TU|1|L5|A|1934
22TU|1|L5|C|1935
22TU|1|L5|C|1936
22TU|1|L5|C|1937
22TU|1|L5|C|1938
22TU|1|L5|A|1939
22TU|1|L5|G|1940
22TU|1|L5|A|1941
22TU|1|L5|A|1942
22TU|1|L5|A|1943
22TU|1|L5|A|1944
*
22TU|1|L5|U|2038
22TU|1|L5|G|2039
22TU|1|L5|A|2040
22TU|1|L5|A|2041
22TU|1|L5|A|2042
22TU|1|L5|A|2043
22TU|1|L5|U|2044
22TU|1|L5|G|2045
22TU|1|L5|G|2046
22TU|1|L5|A|2047
22TU|1|L5|U|2048
22TU|1|L5|G|2049
22TU|1|L5|G|2050
22TU|1|L5|C|2051
22TU|1|L5|G|2052
22TU|1|L5|C|2053
Current chains
- Chain L5
- 28S rRNA
Nearby chains
- Chain L7
- 5S ribosomal RNA; 5S rRNA
- Chain LB
- 60S ribosomal protein L3
- Chain LI
- Large ribosomal subunit protein uL16
- Chain LO
- 60S ribosomal protein L13a
- Chain Lf
- 60S ribosomal protein L35a
- Chain Lm
- Ubiquitin-60S ribosomal protein L40
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