IL_22TU_093

3D structure

PDB id

22TU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human 80S ribosome in complex with DHX29

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CUGAG*CGAAAG

Length

11 nucleotides

Bulged bases

22TU|1|L5|A|2512, 22TU|1|L5|A|2513

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

22TU|1|L5|C|2446
22TU|1|L5|U|2447
22TU|1|L5|G|2448
22TU|1|L5|A|2449
22TU|1|L5|G|2450
*
22TU|1|L5|C|2509
22TU|1|L5|G|2510
22TU|1|L5|A|2511
22TU|1|L5|A|2512
22TU|1|L5|A|2513
22TU|1|L5|G|2514

Current chains

Chain L5

28S rRNA

Nearby chains

Chain L8

5.8S ribosomal RNA; 5.8S rRNA

Chain LA

60S ribosomal protein L8

Chain Lg

60S ribosomal protein L34

Chain Lj

60S ribosomal protein L37

Chain Ll

60S ribosomal protein L39