IL_22TU_206

3D structure

PDB id

22TU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human 80S ribosome in complex with DHX29

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

AGGGCAAGUC*GCU

Length

13 nucleotides

Bulged bases

22TU|1|S2|U|607

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

22TU|1|S2|A|599
22TU|1|S2|G|600
22TU|1|S2|G|601
22TU|1|S2|G|602
22TU|1|S2|C|603
22TU|1|S2|A|604
22TU|1|S2|A|605
22TU|1|S2|G|606
22TU|1|S2|U|607
22TU|1|S2|C|608
*
22TU|1|S2|G|635
22TU|1|S2|C|636
22TU|1|S2|U|637

Current chains

Chain S2

18S rRNA

Nearby chains

Chain SC

40S ribosomal protein S2

Chain SD

40S ribosomal protein S3

Chain SJ

40S ribosomal protein S9

Chain Se

Ubiquitin-like FUBI-ribosomal protein eS30 fusion protein