IL_22TU_251
3D structure
- PDB id
- 22TU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human 80S ribosome in complex with DHX29
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- CC*GCG
- Length
- 5 nucleotides
- Bulged bases
- 22TU|1|S2|C|1423
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_22TU_251 not in the Motif Atlas
- Geometric match to IL_8GLP_055
- Geometric discrepancy: 0.3862
- The information below is about IL_8GLP_055
- Detailed Annotation
- Single bulged C
- Broad Annotation
- No text annotation
- Motif group
- IL_05642.6
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 72
Unit IDs
22TU|1|S2|C|1416
22TU|1|S2|C|1417
*
22TU|1|S2|G|1422
22TU|1|S2|C|1423
22TU|1|S2|G|1424
Current chains
- Chain S2
- 18S rRNA
Nearby chains
- Chain SQ
- 40S ribosomal protein S16
- Chain ST
- 40S ribosomal protein S19
Coloring options: