IL_28UI_044
3D structure
- PDB id
- 28UI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S ribosome, trapped conformational excited state of SSU-h44 apical loop, with A- and P-site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.1 Å
Loop
- Sequence
- GAAG*UGUGCCUUCGGGAAC
- Length
- 19 nucleotides
- Bulged bases
- 28UI|1|A|U|1030, 28UI|1|A|G|1033
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
28UI|1|A|G|1003
28UI|1|A|A|1004
28UI|1|A|A|1005
28UI|1|A|G|1006
*
28UI|1|A|U|1023
28UI|1|A|G|1024
28UI|1|A|U|1025
28UI|1|A|G|1026
28UI|1|A|C|1027
28UI|1|A|C|1028
28UI|1|A|U|1029
28UI|1|A|U|1030
28UI|1|A|C|1031
28UI|1|A|G|1032
28UI|1|A|G|1033
28UI|1|A|G|1034
28UI|1|A|A|1035
28UI|1|A|A|1036
28UI|1|A|C|1037
Current chains
- Chain A
- 16S rRNA
Nearby chains
- Chain N
- Small ribosomal subunit protein uS14
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