IL_28UJ_055
3D structure
- PDB id
- 28UJ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S ribosome, trapped conformational excited state of SSU-h44 apical loop, with A/P- and P/E-site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.16 Å
Loop
- Sequence
- CGGAUU*AUGAAG
- Length
- 12 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_28UJ_055 not in the Motif Atlas
- Homologous match to IL_6CZR_164
- Geometric discrepancy: 0.1904
- The information below is about IL_6CZR_164
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
28UJ|1|A|C|1303
28UJ|1|A|G|1304
28UJ|1|A|G|1305
28UJ|1|A|A|1306
28UJ|1|A|U|1307
28UJ|1|A|U|1308
*
28UJ|1|A|A|1329
28UJ|1|A|U|1330
28UJ|1|A|G|1331
28UJ|1|A|A|1332
28UJ|1|A|A|1333
28UJ|1|A|G|1334
Current chains
- Chain A
- 16S rRNA
Nearby chains
- Chain M
- Small ribosomal subunit protein uS13
Coloring options: