IL_28UM_044

3D structure

PDB id

28UM (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome, conformational excited state mutation in SSU-h41, with A- and P-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.15 Å

Loop

Sequence

GAAG*UGUGCCUUCGGGAAC

Length

19 nucleotides

Bulged bases

28UM|1|A|U|1030

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

28UM|1|A|G|1003
28UM|1|A|A|1004
28UM|1|A|A|1005
28UM|1|A|G|1006
*
28UM|1|A|U|1023
28UM|1|A|G|1024
28UM|1|A|U|1025
28UM|1|A|G|1026
28UM|1|A|C|1027
28UM|1|A|C|1028
28UM|1|A|U|1029
28UM|1|A|U|1030
28UM|1|A|C|1031
28UM|1|A|G|1032
28UM|1|A|G|1033
28UM|1|A|G|1034
28UM|1|A|A|1035
28UM|1|A|A|1036
28UM|1|A|C|1037

Current chains

Chain A

16S rRNA

Nearby chains

Chain N

Small ribosomal subunit protein uS14