IL_28UN_091
3D structure
- PDB id
- 28UN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S ribosome, conformational excited state mutation in SSU-h41, with A/P- and P/E-site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.48 Å
Loop
- Sequence
- GA*UGC
- Length
- 5 nucleotides
- Bulged bases
- 28UN|1|a|G|914
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_28UN_091 not in the Motif Atlas
- Geometric match to IL_8B0X_091
- Geometric discrepancy: 0.2097
- The information below is about IL_8B0X_091
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_28408.4
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 77
Unit IDs
28UN|1|a|G|862
28UN|1|a|A|863
*
28UN|1|a|U|913
28UN|1|a|G|914
28UN|1|a|C|915
Current chains
- Chain a
- 23S rRNA
Nearby chains
- Chain b
- 5S ribosomal RNA; 5S rRNA
- Chain l
- Large ribosomal subunit protein uL16
- Chain u
- Large ribosomal subunit protein bL25
- Chain v
- Large ribosomal subunit protein bL27
Coloring options: