IL_28ZU_045
3D structure
- PDB id
- 28ZU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- human 48S PIC with Kozak mRNA and eIF1A W70A mutant
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- GA*UUU
- Length
- 5 nucleotides
- Bulged bases
- 28ZU|1|S2|U|1016
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_28ZU_045 not in the Motif Atlas
- Geometric match to IL_9E6Q_109
- Geometric discrepancy: 0.2297
- The information below is about IL_9E6Q_109
- Detailed Annotation
- Single bulged U
- Broad Annotation
- No text annotation
- Motif group
- IL_97561.8
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 192
Unit IDs
28ZU|1|S2|G|925
28ZU|1|S2|A|926
*
28ZU|1|S2|U|1015
28ZU|1|S2|U|1016
28ZU|1|S2|U|1017
Current chains
- Chain S2
- 18S ribosomal RNA
Nearby chains
- Chain SN
- 40S ribosomal protein S13
- Chain Sb
- 40S ribosomal protein S27
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