IL_28ZU_078

3D structure

PDB id

28ZU (explore in PDB, NAKB, or RNA 3D Hub)

Description

human 48S PIC with Kozak mRNA and eIF1A W70A mutant

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GUGCCUACC*GUAACC

Length

15 nucleotides

Bulged bases

28ZU|1|S2|A|1580, 28ZU|1|S2|C|1581

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

28ZU|1|S2|G|1550
28ZU|1|S2|U|1551
28ZU|1|S2|G|1552
28ZU|1|S2|C|1553
28ZU|1|S2|C|1554
28ZU|1|S2|U|1555
28ZU|1|S2|A|1556
28ZU|1|S2|C|1557
28ZU|1|S2|C|1558
*
28ZU|1|S2|G|1577
28ZU|1|S2|U|1578
28ZU|1|S2|A|1579
28ZU|1|S2|A|1580
28ZU|1|S2|C|1581
28ZU|1|S2|C|1582

Current chains

Chain S2

18S ribosomal RNA

Nearby chains

Chain SD

40S ribosomal protein S3

Chain SK

40S ribosomal protein S10

Chain SU

40S ribosomal protein S20

Chain Sd

40S ribosomal protein S29