IL_28ZU_092

3D structure

PDB id

28ZU (explore in PDB, NAKB, or RNA 3D Hub)

Description

human 48S PIC with Kozak mRNA and eIF1A W70A mutant

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

CCCCGCCG*CCUGGCGGAGCG

Length

20 nucleotides

Bulged bases

28ZU|1|S2|C|1783

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

28ZU|1|S2|C|1750
28ZU|1|S2|C|1751
28ZU|1|S2|C|1752
28ZU|1|S2|C|1753
28ZU|1|S2|G|1754
28ZU|1|S2|C|1755
28ZU|1|S2|C|1756
28ZU|1|S2|G|1757
*
28ZU|1|S2|C|1773
28ZU|1|S2|C|1774
28ZU|1|S2|U|1775
28ZU|1|S2|G|1776
28ZU|1|S2|G|1777
28ZU|1|S2|C|1778
28ZU|1|S2|G|1779
28ZU|1|S2|G|1780
28ZU|1|S2|A|1781
28ZU|1|S2|G|1782
28ZU|1|S2|C|1783
28ZU|1|S2|G|1784

Current chains

Chain S2

18S ribosomal RNA

Nearby chains

Chain SG

40S ribosomal protein S6