IL_28ZV_020

3D structure

PDB id

28ZV (explore in PDB, NAKB, or RNA 3D Hub)

Description

human 48S PIC with mRNA (non-Kozak)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GGG*CGAU(OMU)C

Length

9 nucleotides

Bulged bases

28ZV|1|S2|OMU|428

QA status

Modified nucleotides: OMU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

28ZV|1|S2|G|411
28ZV|1|S2|G|412
28ZV|1|S2|G|413
*
28ZV|1|S2|C|424
28ZV|1|S2|G|425
28ZV|1|S2|A|426
28ZV|1|S2|U|427
28ZV|1|S2|OMU|428
28ZV|1|S2|C|429

Current chains

Chain S2

18S ribosomal RNA

Nearby chains

Chain SE

Small ribosomal subunit protein eS4, X isoform

Chain SJ

40S ribosomal protein S9

Chain SX

40S ribosomal protein S23