3D structure

PDB id
28ZV (explore in PDB, NAKB, or RNA 3D Hub)
Description
human 48S PIC with mRNA (non-Kozak)
Experimental method
ELECTRON MICROSCOPY
Resolution
2.9 Å

Loop

Sequence
AC*GAA(PSU)
Length
6 nucleotides
Bulged bases
None detected
QA status
Modified nucleotides: PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

28ZV|1|S2|A|802
28ZV|1|S2|C|803
*
28ZV|1|S2|G|860
28ZV|1|S2|A|861
28ZV|1|S2|A|862
28ZV|1|S2|PSU|863

Current chains

Chain S2
18S ribosomal RNA

Nearby chains

Chain SH
40S ribosomal protein S7
Chain SL
Small ribosomal subunit protein uS17
Chain SW
40S ribosomal protein S15a
Chain SX
40S ribosomal protein S23

Coloring options:

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