IL_28ZV_062
3D structure
- PDB id
- 28ZV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- human 48S PIC with mRNA (non-Kozak)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- GACAGGA(OMU)UGACA*UUUCUCGAUUC
- Length
- 24 nucleotides
- Bulged bases
- 28ZV|1|S2|G|1285, 28ZV|1|S2|C|1311, 28ZV|1|S2|U|1314
- QA status
- Modified nucleotides: OMU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
28ZV|1|S2|G|1281
28ZV|1|S2|A|1282
28ZV|1|S2|C|1283
28ZV|1|S2|A|1284
28ZV|1|S2|G|1285
28ZV|1|S2|G|1286
28ZV|1|S2|A|1287
28ZV|1|S2|OMU|1288
28ZV|1|S2|U|1289
28ZV|1|S2|G|1290
28ZV|1|S2|A|1291
28ZV|1|S2|C|1292
28ZV|1|S2|A|1293
*
28ZV|1|S2|U|1306
28ZV|1|S2|U|1307
28ZV|1|S2|U|1308
28ZV|1|S2|C|1309
28ZV|1|S2|U|1310
28ZV|1|S2|C|1311
28ZV|1|S2|G|1312
28ZV|1|S2|A|1313
28ZV|1|S2|U|1314
28ZV|1|S2|U|1315
28ZV|1|S2|C|1316
Current chains
- Chain S2
- 18S ribosomal RNA
Nearby chains
- Chain SK
- 40S ribosomal protein S10
- Chain SM
- 40S ribosomal protein S12
- Chain SP
- 40S ribosomal protein S15
- Chain Sd
- 40S ribosomal protein S29
- Chain Sf
- Ubiquitin
Coloring options: