IL_28ZV_078

3D structure

PDB id

28ZV (explore in PDB, NAKB, or RNA 3D Hub)

Description

human 48S PIC with mRNA (non-Kozak)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GGGAUCG*CAUGAAC

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

28ZV|1|S2|G|1604
28ZV|1|S2|G|1605
28ZV|1|S2|G|1606
28ZV|1|S2|A|1607
28ZV|1|S2|U|1608
28ZV|1|S2|C|1609
28ZV|1|S2|G|1610
*
28ZV|1|S2|C|1629
28ZV|1|S2|A|1630
28ZV|1|S2|U|1631
28ZV|1|S2|G|1632
28ZV|1|S2|A|1633
28ZV|1|S2|A|1634
28ZV|1|S2|C|1635

Current chains

Chain S2

18S ribosomal RNA

Nearby chains

Chain SF

40S ribosomal protein S5

Chain SS

40S ribosomal protein S18

Chain ST

Small ribosomal subunit protein eS19