IL_28ZY_021

3D structure

PDB id

28ZY (explore in PDB, NAKB, or RNA 3D Hub)

Description

human 48S PIC with mRNA (Kozak_2)

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

(PSU)UUCGA*UG

Length

8 nucleotides

Bulged bases

28ZY|1|S2|C|369

QA status

Modified nucleotides: PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

28ZY|1|S2|PSU|366
28ZY|1|S2|U|367
28ZY|1|S2|U|368
28ZY|1|S2|C|369
28ZY|1|S2|G|370
28ZY|1|S2|A|371
*
28ZY|1|S2|U|393
28ZY|1|S2|G|394

Current chains

Chain S2

18S ribosomal RNA

Nearby chains

Chain SI

40S ribosomal protein S8

Chain SL

Small ribosomal subunit protein uS17

Chain c

Eukaryotic translation initiation factor 3 subunit C