IL_28ZY_028

3D structure

PDB id

28ZY (explore in PDB, NAKB, or RNA 3D Hub)

Description

human 48S PIC with mRNA (Kozak_2)

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

AAUAC*GUAAUU

Length

11 nucleotides

Bulged bases

28ZY|1|S2|U|556

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

28ZY|1|S2|A|528
28ZY|1|S2|A|529
28ZY|1|S2|U|530
28ZY|1|S2|A|531
28ZY|1|S2|C|532
*
28ZY|1|S2|G|552
28ZY|1|S2|U|553
28ZY|1|S2|A|554
28ZY|1|S2|A|555
28ZY|1|S2|U|556
28ZY|1|S2|U|557

Current chains

Chain S2

18S ribosomal RNA

Nearby chains

Chain SJ

40S ribosomal protein S9

Chain Se

Ubiquitin-like FUBI-ribosomal protein eS30 fusion protein