IL_28ZY_048

3D structure

PDB id

28ZY (explore in PDB, NAKB, or RNA 3D Hub)

Description

human 48S PIC with mRNA (Kozak_2)

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CGGGG*CAAG

Length

9 nucleotides

Bulged bases

28ZY|1|S2|G|933

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

28ZY|1|S2|C|931
28ZY|1|S2|G|932
28ZY|1|S2|G|933
28ZY|1|S2|G|934
28ZY|1|S2|G|935
*
28ZY|1|S2|C|1007
28ZY|1|S2|A|1008
28ZY|1|S2|A|1009
28ZY|1|S2|G|1010

Current chains

Chain S2

18S ribosomal RNA

Nearby chains

Chain SB

40S ribosomal protein S3a

Chain SN

40S ribosomal protein S13

Chain Sa

40S ribosomal protein S26