IL_28ZY_079

3D structure

PDB id

28ZY (explore in PDB, NAKB, or RNA 3D Hub)

Description

human 48S PIC with mRNA (Kozak_2)

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GUGCCUACC*GUAACC

Length

15 nucleotides

Bulged bases

28ZY|1|S2|A|1580, 28ZY|1|S2|C|1581

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

28ZY|1|S2|G|1550
28ZY|1|S2|U|1551
28ZY|1|S2|G|1552
28ZY|1|S2|C|1553
28ZY|1|S2|C|1554
28ZY|1|S2|U|1555
28ZY|1|S2|A|1556
28ZY|1|S2|C|1557
28ZY|1|S2|C|1558
*
28ZY|1|S2|G|1577
28ZY|1|S2|U|1578
28ZY|1|S2|A|1579
28ZY|1|S2|A|1580
28ZY|1|S2|C|1581
28ZY|1|S2|C|1582

Current chains

Chain S2

18S ribosomal RNA

Nearby chains

Chain SD

40S ribosomal protein S3

Chain SK

40S ribosomal protein S10

Chain SU

40S ribosomal protein S20

Chain Sd

40S ribosomal protein S29