3D structure

PDB id
28ZY (explore in PDB, NAKB, or RNA 3D Hub)
Description
human 48S PIC with mRNA (Kozak_2)
Experimental method
ELECTRON MICROSCOPY
Resolution
3 Å

Loop

Sequence
GGGAUCG*CAUGAAC
Length
14 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

28ZY|1|S2|G|1604
28ZY|1|S2|G|1605
28ZY|1|S2|G|1606
28ZY|1|S2|A|1607
28ZY|1|S2|U|1608
28ZY|1|S2|C|1609
28ZY|1|S2|G|1610
*
28ZY|1|S2|C|1629
28ZY|1|S2|A|1630
28ZY|1|S2|U|1631
28ZY|1|S2|G|1632
28ZY|1|S2|A|1633
28ZY|1|S2|A|1634
28ZY|1|S2|C|1635

Current chains

Chain S2
18S ribosomal RNA

Nearby chains

Chain SS
40S ribosomal protein S18
Chain ST
Small ribosomal subunit protein eS19

Coloring options:

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