IL_2A2E_006

3D structure

PDB id

2A2E (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the RNA subunit of Ribonuclease P. Bacterial A-type.

Experimental method

X-RAY DIFFRACTION

Resolution

3.85 Å

Loop

Sequence

AGC*GGCU

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_2A2E_006 not in the Motif Atlas

Geometric match to IL_7A0S_044

Geometric discrepancy: 0.2359

The information below is about IL_7A0S_044

Detailed Annotation

Intercalated cWW

Broad Annotation

Intercalated cWW

Motif group

IL_53541.1

Basepair signature

cWW-L-cWW

Number of instances in this motif group

12

Unit IDs

2A2E|1|A|A|170
2A2E|1|A|G|171
2A2E|1|A|C|172
*
2A2E|1|A|G|189
2A2E|1|A|G|190
2A2E|1|A|C|191
2A2E|1|A|U|192

Current chains

Chain A

RNA subunit of RNase P

Nearby chains