IL_2EEU_001

3D structure

PDB id

2EEU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Guanine riboswitch U22A, A52U mutant bound to hypoxanthine

Experimental method

X-RAY DIFFRACTION

Resolution

1.95 Å

Loop

Sequence

UCG*CAA

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_2EEU_001 not in the Motif Atlas

Geometric match to IL_5UNE_004

Geometric discrepancy: 0.1634

The information below is about IL_5UNE_004

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_01003.4

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

215

Unit IDs

2EEU|1|A|U|25
2EEU|1|A|C|26
2EEU|1|A|G|27
*
2EEU|1|A|C|43
2EEU|1|A|A|44
2EEU|1|A|A|45

Current chains

Chain A

Guanine riboswitch

Nearby chains