IL_2ET8_001

3D structure

PDB id

2ET8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Complex Between Neamine and the 16S-RRNA A-Site

Experimental method

X-RAY DIFFRACTION

Resolution

2.5 Å

Loop

Sequence

GUC*GUC

Length

6 nucleotides

Bulged bases

2ET8|1|A|U|5

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

Stack and bulge

Broad Annotation

Stack and bulge

Motif group

IL_31737.3

Basepair signature

cWW-L-cWW

Number of instances in this motif group

12

Unit IDs

2ET8|1|A|G|4
2ET8|1|A|U|5
2ET8|1|A|C|6
*
2ET8|1|B|G|41
2ET8|1|B|U|42
2ET8|1|B|C|43

Current chains

Chain A

5'-R(*CP*GP*CP*GP*UP*CP*AP*CP*AP*CP*CP*GP*GP*UP*GP*AP*AP*GP*UP*CP*GP*C)-3'

Chain B

5'-R(*CP*GP*CP*GP*UP*CP*AP*CP*AP*CP*CP*GP*GP*UP*GP*AP*AP*GP*UP*CP*GP*C)-3'

Nearby chains