IL_2F4S_002

3D structure

PDB id

2F4S (explore in PDB, NAKB, or RNA 3D Hub)

Description

A-site RNA in complex with neamine

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

CAC*GAAG

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_50196.1

Basepair signature

cWW-R-cWW

Number of instances in this motif group

17

Unit IDs

2F4S|1|A|C|1407
2F4S|1|A|A|1408
2F4S|1|A|C|1409
*
2F4S|1|B|G|1491
2F4S|1|B|A|1492
2F4S|1|B|A|1493
2F4S|1|B|G|1494

Current chains

Chain A

5'-R(P*GP*CP*GP*UP*CP*AP*CP*AP*CP*CP*GP*GP*UP*GP*AP*AP*GP*UP*CP*GP*C)-3'

Chain B

5'-R(P*GP*CP*GP*UP*CP*AP*CP*AP*CP*CP*GP*GP*UP*GP*AP*AP*GP*UP*CP*GP*C)-3'

Nearby chains