IL_2F4V_074

3D structure

PDB id

2F4V (explore in PDB, NAKB, or RNA 3D Hub)

Description

30S ribosome + designer antibiotic

Experimental method

X-RAY DIFFRACTION

Resolution

3.8 Å

Loop

Sequence

CAUCAGC*GCGACGACG

Length

16 nucleotides

Bulged bases

2F4V|1|A|U|244, 2F4V|1|A|C|280

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

2F4V|1|A|C|242
2F4V|1|A|A|243
2F4V|1|A|U|244
2F4V|1|A|C|245
2F4V|1|A|A|246
2F4V|1|A|G|247
2F4V|1|A|C|248
*
2F4V|1|A|G|276
2F4V|1|A|C|277
2F4V|1|A|G|278
2F4V|1|A|A|279
2F4V|1|A|C|280
2F4V|1|A|G|281
2F4V|1|A|A|282
2F4V|1|A|C|283
2F4V|1|A|G|284

Current chains

Chain A

16S ribosomal RNA

Nearby chains

Chain L

30S ribosomal protein S12

Chain Q

30S ribosomal protein S17