IL_2F4V_080

3D structure

PDB id

2F4V (explore in PDB, NAKB, or RNA 3D Hub)

Description

30S ribosome + designer antibiotic

Experimental method

X-RAY DIFFRACTION

Resolution

3.8 Å

Loop

Sequence

GGAGCGGGC*GCCCGUGAC

Length

18 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

2F4V|1|A|G|1416
2F4V|1|A|G|1417
2F4V|1|A|A|1418
2F4V|1|A|G|1419
2F4V|1|A|C|1420
2F4V|1|A|G|1421
2F4V|1|A|G|1422
2F4V|1|A|G|1423
2F4V|1|A|C|1424
*
2F4V|1|A|G|1476
2F4V|1|A|C|1477
2F4V|1|A|C|1478
2F4V|1|A|C|1479
2F4V|1|A|G|1480
2F4V|1|A|U|1481
2F4V|1|A|G|1482
2F4V|1|A|A|1483
2F4V|1|A|C|1484

Current chains

Chain A

16S ribosomal RNA

Nearby chains

Chain L

30S ribosomal protein S12