IL_2GRW_014

3D structure

PDB id

2GRW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Solution structure of the poliovirus 3'-UTR Y-stem

Experimental method

SOLUTION NMR

Resolution

Loop

Sequence

CCU*AUG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_2GRW_014 not in the Motif Atlas

Geometric match to IL_6RTI_005

Geometric discrepancy: 0.3886

The information below is about IL_6RTI_005

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_38565.3

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

13

Unit IDs

2GRW|8|A|C|4
2GRW|8|A|C|5
2GRW|8|A|U|6
*
2GRW|8|A|A|17
2GRW|8|A|U|18
2GRW|8|A|G|19

Current chains

Chain A

5'-GGACCUCUCGAAAGAGAUGUCC-3'

Nearby chains