IL_2GUN_002

3D structure

PDB id

2GUN (explore in PDB, NAKB, or RNA 3D Hub)

Description

RNA-Binding Affinities and Crystal Structure of Oligonucleotides containing Five-Atom Amide-Based Backbone Structures

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

C(T2T)*AAG

Length

5 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: T2T

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_31737.3

Basepair signature

cWW-L-cWW

Number of instances in this motif group

12

Unit IDs

2GUN|1|A|DC|3
2GUN|1|A|T2T|4
*
2GUN|1|B|A|14
2GUN|1|B|A|15
2GUN|1|B|G|16

Current chains

Chain A

5'-D(*TP*TP*CP*(T2T)P*(CBR)P*TP*TP*C)-3'

Chain B

5'-R(*GP*AP*AP*GP*AP*AP*GP*AP*A)-3'

Nearby chains