IL_2HHH_047
3D structure
- PDB id
- 2HHH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of kasugamycin bound to the 30S ribosomal subunit
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.35 Å
Loop
- Sequence
- CUGC*GAGGAAG
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_2HHH_047 not in the Motif Atlas
- Geometric match to IL_4LFB_050
- Geometric discrepancy: 0.1207
- The information below is about IL_4LFB_050
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_42032.1
- Basepair signature
- cWW-cSH-cWW-tWH-L-cWW-L-L
- Number of instances in this motif group
- 2
Unit IDs
2HHH|1|A|C|1141
2HHH|1|A|U|1142
2HHH|1|A|G|1143
2HHH|1|A|C|1144
*
2HHH|1|A|G|1157
2HHH|1|A|A|1158
2HHH|1|A|G|1159
2HHH|1|A|G|1160
2HHH|1|A|A|1161
2HHH|1|A|A|1162
2HHH|1|A|G|1163
Current chains
- Chain A
- 16S ribosomal RNA
Nearby chains
- Chain B
- 30S ribosomal protein S2
- Chain I
- 30S ribosomal protein S9
Coloring options: