IL_2HHH_064
3D structure
- PDB id
- 2HHH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of kasugamycin bound to the 30S ribosomal subunit
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.35 Å
Loop
- Sequence
- GAAACCC*GGACUGAC
- Length
- 15 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_2HHH_064 not in the Motif Atlas
- Homologous match to IL_6CZR_131
- Geometric discrepancy: 0.1926
- The information below is about IL_6CZR_131
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_30149.1
- Basepair signature
- cWW-L-R-L-R-tWH-L-R-L-R-L-cWW
- Number of instances in this motif group
- 2
Unit IDs
2HHH|1|A|G|445
2HHH|1|A|A|446
2HHH|1|A|A|447
2HHH|1|A|A|448
2HHH|1|A|C|449
2HHH|1|A|C|450
2HHH|1|A|C|451
*
2HHH|1|A|G|461
2HHH|1|A|G|462
2HHH|1|A|A|463
2HHH|1|A|C|464
2HHH|1|A|U|465
2HHH|1|A|G|466
2HHH|1|A|A|467
2HHH|1|A|C|468
Current chains
- Chain A
- 16S ribosomal RNA
Nearby chains
- Chain P
- 30S ribosomal protein S16
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