IL_2JA7_003
3D structure
- PDB id
- 2JA7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CPD lesion containing RNA Polymerase II elongation complex C
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.8 Å
Loop
- Sequence
- GTC*GAC
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Self-complementary:
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
2JA7|1|2|DG|24
2JA7|1|2|DT|25
2JA7|1|2|DC|26
*
2JA7|1|3|G|3
2JA7|1|3|A|4
2JA7|1|3|C|5
Current chains
- Chain 2
- 5'-D(*AP*GP*CP*TP*CP*AP*AP*GP*TP*AP *CP*TP*TP*TP*TTP*CP*CP*BRUP*GP*GP*TP*CP*AP*TP*T)-3'
- Chain 3
- 5'-R(*UP*UP*CP*GP*AP*CP*CP*AP*GP*GP*AP)-3'
Nearby chains
- Chain A
- DNA-DIRECTED RNA POLYMERASE II LARGEST SUBUNIT
- Chain B
- DNA-DIRECTED RNA POLYMERASE II 140 KDA POLYPEPTIDE
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