IL_2JL5_034

3D structure

PDB id

2JL5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Insights into translational termination from the structure of RF2 bound to the ribosome (Part 1 of 4). This file contains the 30S subunit.

Experimental method

X-RAY DIFFRACTION

Resolution

3.45 Å

Loop

Sequence

GGG*UU

Length

5 nucleotides

Bulged bases

2JL5|1|A|G|926

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_2JL5_034 not in the Motif Atlas

Geometric match to IL_4LFB_036

Geometric discrepancy: 0.1042

The information below is about IL_4LFB_036

Detailed Annotation

Single bulged G

Broad Annotation

No text annotation

Motif group

IL_28408.2

Basepair signature

cWW-L-cWW

Number of instances in this motif group

69

Unit IDs

2JL5|1|A|G|925
2JL5|1|A|G|926
2JL5|1|A|G|927
*
2JL5|1|A|U|1390
2JL5|1|A|U|1391

Current chains

Chain A

16S RRNA

Nearby chains

Chain X

MRNA