IL_2JL8_041

3D structure

PDB id

2JL8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Insights into translational termination from the structure of RF2 bound to the ribosome (part 4 of 4). This file contains the 50S subunit.

Experimental method

X-RAY DIFFRACTION

Resolution

3.45 Å

Loop

Sequence

CGAAGACAGCC*GGUCGAG

Length

18 nucleotides

Bulged bases

2JL8|1|A|A|1046

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

2JL8|1|A|C|1043
2JL8|1|A|G|1044
2JL8|1|A|A|1045
2JL8|1|A|A|1046
2JL8|1|A|G|1047
2JL8|1|A|A|1048
2JL8|1|A|C|1049
2JL8|1|A|A|1050
2JL8|1|A|G|1051
2JL8|1|A|C|1052
2JL8|1|A|C|1053
*
2JL8|1|A|G|1106
2JL8|1|A|G|1107
2JL8|1|A|U|1108
2JL8|1|A|C|1109
2JL8|1|A|G|1110
2JL8|1|A|A|1111
2JL8|1|A|G|1112

Current chains

Chain A

23S RIBOSOMAL RNA

Nearby chains

Chain 9

50S RIBOSOMAL PROTEIN L36

Chain H

50S RIBOSOMAL PROTEIN L6

Chain J

50S RIBOSOMAL PROTEIN L10