IL_2L3C_016

3D structure

PDB id

2L3C (explore in PDB, NAKB, or RNA 3D Hub)

Description

Solution structure of ADAR2 dsRBM1 bound to LSL RNA

Experimental method

SOLUTION NMR

Resolution

Loop

Sequence

AGU*AGU

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_2L3C_016 not in the Motif Atlas

Geometric match to IL_6CZR_171

Geometric discrepancy: 0.3131

The information below is about IL_6CZR_171

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_87907.1

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

183

Unit IDs

2L3C|16|B|A|78
2L3C|16|B|G|79
2L3C|16|B|U|80
*
2L3C|16|B|A|103
2L3C|16|B|G|104
2L3C|16|B|U|105

Current chains

Chain B

RNA (34-MER)

Nearby chains

Chain A

Double-stranded RNA-specific editase 1