IL_2N0R_006

3D structure

PDB id

2N0R (explore in PDB, NAKB, or RNA 3D Hub)

Description

RNA structure determination by solid-state NMR spectroscopy

Experimental method

SOLID-STATE NMR

Resolution

Loop

Sequence

CUGAG*CAAUGAUG

Length

13 nucleotides

Bulged bases

2N0R|6|A|U|20

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_2N0R_006 not in the Motif Atlas

Geometric match to IL_3NMU_004

Geometric discrepancy: 0.345

The information below is about IL_3NMU_004

Detailed Annotation

Kink-turn

Broad Annotation

No text annotation

Motif group

IL_69229.4

Basepair signature

cWW-tSS-tSH-L-tHS-cWW-cWW

Number of instances in this motif group

7

Unit IDs

2N0R|6|A|C|2
2N0R|6|A|U|3
2N0R|6|A|G|4
2N0R|6|A|A|5
2N0R|6|A|G|6
*
2N0R|6|A|C|17
2N0R|6|A|A|18
2N0R|6|A|A|19
2N0R|6|A|U|20
2N0R|6|A|G|21
2N0R|6|A|A|22
2N0R|6|A|U|23
2N0R|6|A|G|24

Current chains

Chain A

RNA (5'-R(*GP*CP*UP*GP*AP*GP*CP*UP*CP*GP*AP*AP*AP*GP*AP*GP*CP*AP*AP*UP*GP*AP*UP*GP*UP*C)-3')

Nearby chains