IL_2O3X_001

3D structure

PDB id

2O3X (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of the Prokaryotic Ribosomal Decoding Site Complexed with Paromamine Derivative NB30

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

GUC*GUC

Length

6 nucleotides

Bulged bases

2O3X|1|A|U|6

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

Stack and bulge

Broad Annotation

Stack and bulge

Motif group

IL_68582.1

Basepair signature

cWW-L-cWW

Number of instances in this motif group

13

Unit IDs

2O3X|1|A|G|5
2O3X|1|A|U|6
2O3X|1|A|C|7
*
2O3X|1|B|G|42
2O3X|1|B|U|43
2O3X|1|B|C|44

Current chains

Chain A

RNA (5'-R(*UP*UP*GP*CP*GP*UP*CP*AP*CP*AP*CP*CP*GP*GP*UP*GP*AP*AP*GP*UP*CP*GP*C)-3')

Chain B

RNA (5'-R(*UP*UP*GP*CP*GP*UP*CP*AP*CP*AP*CP*CP*GP*GP*UP*GP*AP*AP*GP*UP*CP*GP*C)-3')

Nearby chains