IL_2O44_029

3D structure

PDB id

2O44 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of 23S rRNA of the large ribosomal subunit from Deinococcus radiodurans in complex with the macrolide josamycin

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

AGCACUC*GAAACU

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

2O44|1|A|A|876
2O44|1|A|G|877
2O44|1|A|C|878
2O44|1|A|A|879
2O44|1|A|C|880
2O44|1|A|U|881
2O44|1|A|C|882
*
2O44|1|A|G|920
2O44|1|A|A|921
2O44|1|A|A|922
2O44|1|A|A|923
2O44|1|A|C|924
2O44|1|A|U|925

Current chains

Chain A

23S rRNA

Nearby chains