IL_2O44_115

3D structure

PDB id

2O44 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of 23S rRNA of the large ribosomal subunit from Deinococcus radiodurans in complex with the macrolide josamycin

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

CUCUGCGUAGGUGG*CACCCUGAG

Length

23 nucleotides

Bulged bases

2O44|1|A|U|2096, 2O44|1|A|A|2097

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

2O44|1|A|C|2089
2O44|1|A|U|2090
2O44|1|A|C|2091
2O44|1|A|U|2092
2O44|1|A|G|2093
2O44|1|A|C|2094
2O44|1|A|G|2095
2O44|1|A|U|2096
2O44|1|A|A|2097
2O44|1|A|G|2103
2O44|1|A|G|2104
2O44|1|A|U|2105
2O44|1|A|G|2106
2O44|1|A|G|2107
*
2O44|1|A|C|2158
2O44|1|A|A|2159
2O44|1|A|C|2160
2O44|1|A|C|2161
2O44|1|A|C|2162
2O44|1|A|U|2163
2O44|1|A|G|2164
2O44|1|A|A|2165
2O44|1|A|G|2166

Current chains

Chain A

23S rRNA

Nearby chains