IL_2O44_117

3D structure

PDB id

2O44 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of 23S rRNA of the large ribosomal subunit from Deinococcus radiodurans in complex with the macrolide josamycin

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

UCCUGUAGA*UCCGAAGGGG

Length

19 nucleotides

Bulged bases

2O44|1|A|U|873

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

2O44|1|A|U|868
2O44|1|A|C|869
2O44|1|A|C|870
2O44|1|A|U|871
2O44|1|A|G|872
2O44|1|A|U|873
2O44|1|A|A|874
2O44|1|A|G|875
2O44|1|A|A|876
*
2O44|1|A|U|925
2O44|1|A|C|926
2O44|1|A|C|927
2O44|1|A|G|928
2O44|1|A|A|929
2O44|1|A|A|930
2O44|1|A|G|931
2O44|1|A|G|932
2O44|1|A|G|933
2O44|1|A|G|934

Current chains

Chain A

23S rRNA

Nearby chains