IL_2O44_125

3D structure

PDB id

2O44 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of 23S rRNA of the large ribosomal subunit from Deinococcus radiodurans in complex with the macrolide josamycin

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

GGGACG*CCAAGAAAAGC

Length

17 nucleotides

Bulged bases

2O44|1|A|A|1441, 2O44|1|A|C|1442, 2O44|1|A|A|1582

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

2O44|1|A|G|1438
2O44|1|A|G|1439
2O44|1|A|G|1440
2O44|1|A|A|1441
2O44|1|A|C|1442
2O44|1|A|G|1443
*
2O44|1|A|C|1580
2O44|1|A|C|1581
2O44|1|A|A|1582
2O44|1|A|A|1583
2O44|1|A|G|1584
2O44|1|A|A|1585
2O44|1|A|A|1586
2O44|1|A|A|1587
2O44|1|A|A|1588
2O44|1|A|G|1589
2O44|1|A|C|1590

Current chains

Chain A

23S rRNA

Nearby chains