IL_2O44_131

3D structure

PDB id

2O44 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of 23S rRNA of the large ribosomal subunit from Deinococcus radiodurans in complex with the macrolide josamycin

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

CCCAAAGGUCACCUC*GAGCG

Length

20 nucleotides

Bulged bases

2O44|1|A|A|2267, 2O44|1|A|C|2274, 2O44|1|A|U|2275

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

2O44|1|A|C|2262
2O44|1|A|C|2263
2O44|1|A|C|2264
2O44|1|A|A|2265
2O44|1|A|A|2266
2O44|1|A|A|2267
2O44|1|A|G|2268
2O44|1|A|G|2269
2O44|1|A|U|2270
2O44|1|A|C|2271
2O44|1|A|A|2272
2O44|1|A|C|2273
2O44|1|A|C|2274
2O44|1|A|U|2275
2O44|1|A|C|2276
*
2O44|1|A|G|2300
2O44|1|A|A|2301
2O44|1|A|G|2302
2O44|1|A|C|2303
2O44|1|A|G|2304

Current chains

Chain A

23S rRNA

Nearby chains