IL_2O44_140

3D structure

PDB id

2O44 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of 23S rRNA of the large ribosomal subunit from Deinococcus radiodurans in complex with the macrolide josamycin

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

CUUAAGU*ACGGAG

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

2O44|1|A|C|615
2O44|1|A|U|616
2O44|1|A|U|617
2O44|1|A|A|618
2O44|1|A|A|619
2O44|1|A|G|620
2O44|1|A|U|621
*
2O44|1|A|A|628
2O44|1|A|C|629
2O44|1|A|G|630
2O44|1|A|G|631
2O44|1|A|A|632
2O44|1|A|G|633

Current chains

Chain A

23S rRNA

Nearby chains