IL_2O45_010

3D structure

PDB id

2O45 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 23S rRNA of the large ribosomal subunit from Deinococcus Radiodurans in complex with the macrolide RU-69874

Experimental method

X-RAY DIFFRACTION

Resolution

3.6 Å

Loop

Sequence

GGAACUG*CUCAGUAC

Length

15 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

2O45|1|A|G|165
2O45|1|A|G|166
2O45|1|A|A|167
2O45|1|A|A|168
2O45|1|A|C|169
2O45|1|A|U|170
2O45|1|A|G|171
*
2O45|1|A|C|178
2O45|1|A|U|179
2O45|1|A|C|180
2O45|1|A|A|181
2O45|1|A|G|182
2O45|1|A|U|183
2O45|1|A|A|184
2O45|1|A|C|185

Current chains

Chain A

23S rRNA

Nearby chains