IL_2O45_012

3D structure

PDB id

2O45 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 23S rRNA of the large ribosomal subunit from Deinococcus Radiodurans in complex with the macrolide RU-69874

Experimental method

X-RAY DIFFRACTION

Resolution

3.6 Å

Loop

Sequence

CCCCUC*GAGCGG

Length

12 nucleotides

Bulged bases

2O45|1|A|C|300

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

2O45|1|A|C|298
2O45|1|A|C|299
2O45|1|A|C|300
2O45|1|A|C|301
2O45|1|A|U|302
2O45|1|A|C|303
*
2O45|1|A|G|359
2O45|1|A|A|360
2O45|1|A|G|361
2O45|1|A|C|362
2O45|1|A|G|363
2O45|1|A|G|364

Current chains

Chain A

23S rRNA

Nearby chains